Release | Date | Description | Instructions | Download |
1.2.8 | 17.05.2013 | GPViz ZIP package incl. test data | User Manual | download |
1.2.8 | 17.05.2013 | GPViz Webstart (1GB RAM) | User Manual | download |
1.2.7 | 17.04.2013 | GPViz ZIP package incl. test data | User Manual | download |
1.2.6 | 27.03.2013 | GPViz ZIP package incl. test data | User Manual | download |
Description | Download |
General Transfer Format (GTF) file |
Refseq_hg19.gtf Ensembl_GRCh37.gtf |
Protein domains |
Refseq_CDD.txt Ensembl_IPR.txt Uniprot_PFAM.txt |
Genomic regions | Exons.bed |
Genomic variants |
Somatic_mutations.maf |
Annotation files |
Human_Refseq.txt Human_Ensembl.txt |
Description | Download |
General Transfer Format (GTF) file |
Refseq_mm10.gtf Ensembl_GRCm38.gtf |
Protein domains |
Mouse_Refseq_CDD.txt Mouse_Ensembl_IPR.txt Mouse_Uniprot_PFAM.txt |
Genomic regions | Mouse_Exons.bed |
Genomic variants |
Mouse_mutations.mut |
Annotation files |
Mouse_Refseq.txt Mouse_Ensembl.txt |
Description | Link |
Gene models and exon positions (GTF) |
ENSEMBL database UCSC Table browser refGene, refFlat CBCB iGenomes |
Domains |
NCBI Batch CD search tool ENSEMBL translation, protein features, interpro, analysis, xref PFAM |
Annotation |
ENSEMBL Mart NCBI gene2refseq, gene_info UniProt |