INDEX FILENAME NAME CELL TREATMENT CONDITION REPLICATE SAMPLE 1 MB1_Aligned.sortedByCoord.out_count MB1 HEL CTRL HEL_CTRL 1 HEL_CTRL_1 2 MB2_Aligned.sortedByCoord.out_count MB2 HEL CTRL HEL_CTRL 2 HEL_CTRL_2 3 MB3_Aligned.sortedByCoord.out_count MB3 HEL CTRL HEL_CTRL 3 HEL_CTRL_3 4 MB4_Aligned.sortedByCoord.out_count MB4 HEL 14D HEL_14D 1 HEL_14D_1 5 MB5_Aligned.sortedByCoord.out_count MB5 HEL 14D HEL_14D 2 HEL_14D_2 6 MB6_Aligned.sortedByCoord.out_count MB6 HEL 14D HEL_14D 3 HEL_14D_3 7 MB7_Aligned.sortedByCoord.out_count MB7 HEL 15W HEL_15W 1 HEL_15W_1 8 MB8_Aligned.sortedByCoord.out_count MB8 HEL 15W HEL_15W 2 HEL_15W_2 9 MB9_Aligned.sortedByCoord.out_count MB9 HEL 15W HEL_15W 3 HEL_15W_3 10 MB10_Aligned.sortedByCoord.out_count MB10 SET CTRL SET_CTRL 1 SET_CTRL_1 11 MB11_Aligned.sortedByCoord.out_count MB11 SET CTRL SET_CTRL 2 SET_CTRL_2 12 MB12_Aligned.sortedByCoord.out_count MB12 SET CTRL SET_CTRL 3 SET_CTRL_3 13 MB13_Aligned.sortedByCoord.out_count MB13 SET 14D SET_14D 1 SET_14D_1 14 MB14_Aligned.sortedByCoord.out_count MB14 SET 14D SET_14D 2 SET_14D_2 15 MB15_Aligned.sortedByCoord.out_count MB15 SET 14D SET_14D 3 SET_14D_3 16 MB16_Aligned.sortedByCoord.out_count MB16 SET 15W SET_15W 1 SET_15W_1 17 MB17_Aligned.sortedByCoord.out_count MB17 SET 15W SET_15W 2 SET_15W_2 18 MB18_Aligned.sortedByCoord.out_count MB18 SET 15W SET_15W 3 SET_15W_3